Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
ATN1P54259 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.48■□□□□ 0.55
ATN1P54259 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.48■□□□□ 0.55
ATN1P54259 AC011495.1-201ENST00000498085 584 ntBASIC18.48■□□□□ 0.55
ATN1P54259 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.48■□□□□ 0.55
ATN1P54259 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.48■□□□□ 0.55
ATN1P54259 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.48■□□□□ 0.55
ATN1P54259 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.48■□□□□ 0.55
ATN1P54259 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATN1P54259 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 AC138028.4-201ENST00000564984 1845 ntBASIC18.48■□□□□ 0.55
ATN1P54259 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATN1P54259 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.48■□□□□ 0.55
ATN1P54259 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.47■□□□□ 0.55
ATN1P54259 AC087499.6-201ENST00000411576 835 ntBASIC18.47■□□□□ 0.55
ATN1P54259 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
ATN1P54259 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC18.47■□□□□ 0.55
ATN1P54259 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.47■□□□□ 0.55
ATN1P54259 AC092658.1-201ENST00000505836 891 ntBASIC18.47■□□□□ 0.55
ATN1P54259 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.47■□□□□ 0.55
ATN1P54259 MPDU1-223ENST00000582151 728 ntBASIC18.47■□□□□ 0.55
ATN1P54259 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.47■□□□□ 0.55
ATN1P54259 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.47■□□□□ 0.55
ATN1P54259 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATN1P54259 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATN1P54259 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.47■□□□□ 0.55
ATN1P54259 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.47■□□□□ 0.55
ATN1P54259 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATN1P54259 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATN1P54259 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATN1P54259 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATN1P54259 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.46■□□□□ 0.55
ATN1P54259 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ATN1P54259 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATN1P54259 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATN1P54259 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.46■□□□□ 0.55
ATN1P54259 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.46■□□□□ 0.55
ATN1P54259 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.46■□□□□ 0.55
ATN1P54259 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ATN1P54259 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATN1P54259 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATN1P54259 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ATN1P54259 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATN1P54259 AC022210.1-201ENST00000449856 793 ntBASIC18.46■□□□□ 0.55
ATN1P54259 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ATN1P54259 PRYP6-201ENST00000514804 343 ntBASIC18.46■□□□□ 0.55
ATN1P54259 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC18.46■□□□□ 0.55
ATN1P54259 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.46■□□□□ 0.55
ATN1P54259 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.46■□□□□ 0.55
ATN1P54259 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
ATN1P54259 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.46■□□□□ 0.55
ATN1P54259 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.46■□□□□ 0.55
ATN1P54259 AC021097.1-201ENST00000607902 574 ntBASIC18.46■□□□□ 0.55
ATN1P54259 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.46■□□□□ 0.55
ATN1P54259 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
ATN1P54259 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.46■□□□□ 0.55
ATN1P54259 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.46■□□□□ 0.55
ATN1P54259 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATN1P54259 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
ATN1P54259 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATN1P54259 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ATN1P54259 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ATN1P54259 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATN1P54259 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ATN1P54259 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATN1P54259 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATN1P54259 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATN1P54259 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ATN1P54259 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ATN1P54259 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATN1P54259 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATN1P54259 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.45■□□□□ 0.54
ATN1P54259 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.45■□□□□ 0.54
ATN1P54259 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATN1P54259 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATN1P54259 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.45■□□□□ 0.54
ATN1P54259 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.45■□□□□ 0.54
ATN1P54259 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
ATN1P54259 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ATN1P54259 AC004790.1-201ENST00000612686 536 ntBASIC18.45■□□□□ 0.54
ATN1P54259 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATN1P54259 AC008147.4-201ENST00000617570 1204 ntBASIC18.45■□□□□ 0.54
ATN1P54259 AC007431.3-201ENST00000623221 587 ntBASIC18.45■□□□□ 0.54
ATN1P54259 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms