Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KRT8P10-201ENST00000450021 1447 ntBASIC16.4■□□□□ 0.22
CLCN2P51788 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLCN2P51788 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN2P51788 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 SCARNA2-201ENST00000458748 420 ntBASIC16.4■□□□□ 0.22
CLCN2P51788 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.4■□□□□ 0.22
CLCN2P51788 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.4■□□□□ 0.22
CLCN2P51788 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLCN2P51788 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN2P51788 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLCN2P51788 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN2P51788 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN2P51788 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN2P51788 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLCN2P51788 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLCN2P51788 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.22
CLCN2P51788 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLCN2P51788 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.39■□□□□ 0.21
CLCN2P51788 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN2P51788 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CLCN2P51788 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CLCN2P51788 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CLCN2P51788 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLCN2P51788 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLCN2P51788 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN2P51788 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.39■□□□□ 0.21
CLCN2P51788 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 AP002469.2-201ENST00000531724 424 ntBASIC16.39■□□□□ 0.21
CLCN2P51788 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.39■□□□□ 0.21
CLCN2P51788 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN2P51788 AC064862.7-201ENST00000604520 867 ntBASIC16.39■□□□□ 0.21
CLCN2P51788 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCN2P51788 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLCN2P51788 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCN2P51788 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLCN2P51788 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 HYMAI-201ENST00000635591 3347 ntBASIC16.39■□□□□ 0.21
CLCN2P51788 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCN2P51788 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCN2P51788 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CLCN2P51788 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN2P51788 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN2P51788 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN2P51788 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLCN2P51788 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLCN2P51788 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN2P51788 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN2P51788 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
CLCN2P51788 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN2P51788 FGFR3P6-201ENST00000457012 610 ntBASIC16.38■□□□□ 0.21
CLCN2P51788 AL662844.1-201ENST00000546340 181 ntBASIC16.38■□□□□ 0.21
CLCN2P51788 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.38■□□□□ 0.21
CLCN2P51788 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN2P51788 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN2P51788 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN2P51788 AL139327.4-201ENST00000612362 153 ntBASIC16.38■□□□□ 0.21
CLCN2P51788 AD001527.2-201ENST00000622994 785 ntBASIC16.38■□□□□ 0.21
CLCN2P51788 AP000867.4-201ENST00000641616 219 ntBASIC16.38■□□□□ 0.21
CLCN2P51788 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN2P51788 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN2P51788 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms