Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
USP11P51784 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19■□□□□ 0.63
USP11P51784 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.99■□□□□ 0.63
USP11P51784 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.99■□□□□ 0.63
USP11P51784 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.99■□□□□ 0.63
USP11P51784 AC006538.1-201ENST00000567905 1585 ntBASIC18.99■□□□□ 0.63
USP11P51784 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.99■□□□□ 0.63
USP11P51784 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 RNF216P1-203ENST00000404404 2427 ntBASIC18.99■□□□□ 0.63
USP11P51784 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
USP11P51784 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 KRT18P13-201ENST00000400056 1290 ntBASIC18.99■□□□□ 0.63
USP11P51784 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.99■□□□□ 0.63
USP11P51784 HTR5BP-201ENST00000430851 1154 ntBASIC18.99■□□□□ 0.63
USP11P51784 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.99■□□□□ 0.63
USP11P51784 YBX1P5-201ENST00000509441 847 ntBASIC18.99■□□□□ 0.63
USP11P51784 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.99■□□□□ 0.63
USP11P51784 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.99■□□□□ 0.63
USP11P51784 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.99■□□□□ 0.63
USP11P51784 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.99■□□□□ 0.63
USP11P51784 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.99■□□□□ 0.63
USP11P51784 AC021097.1-201ENST00000607902 574 ntBASIC18.99■□□□□ 0.63
USP11P51784 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.99■□□□□ 0.63
USP11P51784 AC092902.6-201ENST00000641783 218 ntBASIC18.99■□□□□ 0.63
USP11P51784 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
USP11P51784 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.99■□□□□ 0.63
USP11P51784 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
USP11P51784 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.99■□□□□ 0.63
USP11P51784 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 AC106886.4-201ENST00000623557 2502 ntBASIC18.99■□□□□ 0.63
USP11P51784 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.99■□□□□ 0.63
USP11P51784 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP11P51784 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
USP11P51784 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
USP11P51784 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
USP11P51784 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.98■□□□□ 0.63
USP11P51784 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.98■□□□□ 0.63
USP11P51784 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.98■□□□□ 0.63
USP11P51784 FAM58CP-201ENST00000435741 640 ntBASIC18.98■□□□□ 0.63
USP11P51784 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.98■□□□□ 0.63
USP11P51784 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
USP11P51784 AC010327.4-202ENST00000591484 748 ntBASIC18.98■□□□□ 0.63
USP11P51784 AL161645.1-201ENST00000622716 1255 ntBASIC18.98■□□□□ 0.63
USP11P51784 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
USP11P51784 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
USP11P51784 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
USP11P51784 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
USP11P51784 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.98■□□□□ 0.63
USP11P51784 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.98■□□□□ 0.63
USP11P51784 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP11P51784 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.97■□□□□ 0.63
USP11P51784 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.97■□□□□ 0.63
USP11P51784 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.97■□□□□ 0.63
USP11P51784 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
USP11P51784 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms