Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TFAMP1-201ENST00000412727 736 ntBASIC14.52□□□□□ -0.09
CD40P25942 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.52□□□□□ -0.09
CD40P25942 AC092474.2-201ENST00000424288 719 ntBASIC14.52□□□□□ -0.09
CD40P25942 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40P25942 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.52□□□□□ -0.09
CD40P25942 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40P25942 AC027612.4-201ENST00000605371 583 ntBASIC14.52□□□□□ -0.09
CD40P25942 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.52□□□□□ -0.09
CD40P25942 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CD40P25942 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40P25942 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40P25942 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40P25942 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40P25942 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40P25942 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.52□□□□□ -0.09
CD40P25942 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40P25942 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40P25942 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CD40P25942 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40P25942 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CD40P25942 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40P25942 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40P25942 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40P25942 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 MIR3909-201ENST00000579518 119 ntBASIC14.51□□□□□ -0.09
CD40P25942 MIR4492-201ENST00000581627 80 ntBASIC14.51□□□□□ -0.09
CD40P25942 CYP2A7P1-201ENST00000595391 815 ntBASIC14.51□□□□□ -0.09
CD40P25942 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40P25942 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40P25942 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40P25942 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CD40P25942 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CD40P25942 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CD40P25942 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40P25942 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.51□□□□□ -0.09
CD40P25942 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.51□□□□□ -0.09
CD40P25942 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD40P25942 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.51□□□□□ -0.09
CD40P25942 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.5□□□□□ -0.09
CD40P25942 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 KRT8P48-201ENST00000515599 1220 ntBASIC14.5□□□□□ -0.09
CD40P25942 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 AL135744.1-201ENST00000565098 629 ntBASIC14.5□□□□□ -0.09
CD40P25942 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.5□□□□□ -0.09
CD40P25942 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.5□□□□□ -0.09
CD40P25942 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.5□□□□□ -0.09
CD40P25942 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.5□□□□□ -0.09
CD40P25942 AC139713.2-201ENST00000641328 2723 ntBASIC14.5□□□□□ -0.09
CD40P25942 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CD40P25942 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD40P25942 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms