Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.3□□□□□ -0.12
VAMP1P23763 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
VAMP1P23763 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VAMP1P23763 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.3□□□□□ -0.12
VAMP1P23763 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VAMP1P23763 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.3□□□□□ -0.12
VAMP1P23763 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VAMP1P23763 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.3□□□□□ -0.12
VAMP1P23763 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VAMP1P23763 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.29□□□□□ -0.12
VAMP1P23763 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VAMP1P23763 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
VAMP1P23763 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.29□□□□□ -0.12
VAMP1P23763 AC104640.1-201ENST00000562617 2109 ntBASIC14.29□□□□□ -0.12
VAMP1P23763 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.29□□□□□ -0.12
VAMP1P23763 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.29□□□□□ -0.12
VAMP1P23763 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 HLA-L-209ENST00000420110 1011 ntBASIC14.29□□□□□ -0.12
VAMP1P23763 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.29□□□□□ -0.12
VAMP1P23763 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC14.29□□□□□ -0.12
VAMP1P23763 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.29□□□□□ -0.12
VAMP1P23763 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.29□□□□□ -0.12
VAMP1P23763 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.29□□□□□ -0.12
VAMP1P23763 AP001412.1-201ENST00000608405 714 ntBASIC14.29□□□□□ -0.12
VAMP1P23763 AC010653.2-201ENST00000623505 997 ntBASIC14.29□□□□□ -0.12
VAMP1P23763 AC079416.2-201ENST00000625035 1193 ntBASIC14.29□□□□□ -0.12
VAMP1P23763 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 AC092384.3-202ENST00000564646 2873 ntBASIC14.29□□□□□ -0.12
VAMP1P23763 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VAMP1P23763 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.29□□□□□ -0.12
VAMP1P23763 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.29□□□□□ -0.12
VAMP1P23763 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VAMP1P23763 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAMP1P23763 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VAMP1P23763 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VAMP1P23763 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
VAMP1P23763 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VAMP1P23763 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
VAMP1P23763 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.28□□□□□ -0.12
VAMP1P23763 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.28□□□□□ -0.12
VAMP1P23763 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.28□□□□□ -0.12
VAMP1P23763 RPS2P55-201ENST00000397318 883 ntBASIC14.28□□□□□ -0.12
VAMP1P23763 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VAMP1P23763 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VAMP1P23763 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VAMP1P23763 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms