Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC130P13994 AL031432.2-201ENST00000566714 459 ntBASIC17.84■□□□□ 0.45
CCDC130P13994 AL928711.1-201ENST00000570165 459 ntBASIC17.84■□□□□ 0.45
CCDC130P13994 MTDHP5-201ENST00000598980 586 ntBASIC17.84■□□□□ 0.45
CCDC130P13994 AC068137.2-201ENST00000605408 478 ntBASIC17.84■□□□□ 0.45
CCDC130P13994 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.84■□□□□ 0.45
CCDC130P13994 AL645728.2-201ENST00000641974 660 ntBASIC17.84■□□□□ 0.45
CCDC130P13994 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC130P13994 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC130P13994 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC130P13994 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC130P13994 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC130P13994 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC130P13994 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC130P13994 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC130P13994 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC130P13994 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC130P13994 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.83■□□□□ 0.45
CCDC130P13994 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CCDC130P13994 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC130P13994 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC130P13994 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC130P13994 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
CCDC130P13994 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC130P13994 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC130P13994 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CCDC130P13994 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC130P13994 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 HCG4-201ENST00000418983 998 ntBASIC17.83■□□□□ 0.44
CCDC130P13994 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC130P13994 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CCDC130P13994 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC130P13994 AC087641.1-201ENST00000557561 1021 ntBASIC17.83■□□□□ 0.44
CCDC130P13994 CYP2A7P1-201ENST00000595391 815 ntBASIC17.83■□□□□ 0.44
CCDC130P13994 RNF216P1-203ENST00000404404 2427 ntBASIC17.83■□□□□ 0.44
CCDC130P13994 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCDC130P13994 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC130P13994 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC130P13994 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CCDC130P13994 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 AC099398.1-201ENST00000567919 2776 ntBASIC17.82■□□□□ 0.44
CCDC130P13994 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC130P13994 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC130P13994 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC130P13994 RPSAP43-201ENST00000402237 625 ntBASIC17.82■□□□□ 0.44
CCDC130P13994 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC130P13994 DNAJB3-201ENST00000446806 729 ntBASIC17.82■□□□□ 0.44
CCDC130P13994 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC130P13994 AC112482.1-201ENST00000492080 688 ntBASIC17.82■□□□□ 0.44
CCDC130P13994 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC130P13994 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.82■□□□□ 0.44
CCDC130P13994 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC130P13994 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC130P13994 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC130P13994 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC130P13994 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC130P13994 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CCDC130P13994 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CCDC130P13994 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC130P13994 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC130P13994 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC130P13994 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC130P13994 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 AL671710.1-201ENST00000610245 2349 ntBASIC17.81■□□□□ 0.44
CCDC130P13994 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC130P13994 AC006277.1-201ENST00000624348 1610 ntBASIC17.81■□□□□ 0.44
CCDC130P13994 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC130P13994 UPF3AP3-201ENST00000420996 769 ntBASIC17.81■□□□□ 0.44
CCDC130P13994 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.81■□□□□ 0.44
CCDC130P13994 FAM58CP-201ENST00000435741 640 ntBASIC17.81■□□□□ 0.44
CCDC130P13994 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms