Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 ECEL1P2-202ENST00000465689 757 ntBASIC12.63□□□□□ -0.39
SMIM17P0DL12 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 AC008550.1-201ENST00000511500 884 ntBASIC12.63□□□□□ -0.39
SMIM17P0DL12 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 AC140113.3-201ENST00000605663 199 ntBASIC12.63□□□□□ -0.39
SMIM17P0DL12 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
SMIM17P0DL12 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM17P0DL12 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 AC046185.3-201ENST00000623228 1824 ntBASIC12.62□□□□□ -0.39
SMIM17P0DL12 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 ECEL1P3-201ENST00000427961 737 ntBASIC12.62□□□□□ -0.39
SMIM17P0DL12 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 AL136038.4-201ENST00000603606 1261 ntBASIC12.62□□□□□ -0.39
SMIM17P0DL12 AC004263.2-201ENST00000617183 678 ntBASIC12.62□□□□□ -0.39
SMIM17P0DL12 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 AP006294.2-201ENST00000641667 209 ntBASIC12.62□□□□□ -0.39
SMIM17P0DL12 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM17P0DL12 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM17P0DL12 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM17P0DL12 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms