Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.52■□□□□ 0.55
SRGAP2CP0DJJ0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.52■□□□□ 0.55
SRGAP2CP0DJJ0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRGAP2CP0DJJ0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRGAP2CP0DJJ0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 TUBB8P12-201ENST00000308911 1335 ntBASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 TUBB7P-202ENST00000428444 1305 ntBASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 TUBB8P7-204ENST00000567960 1332 ntBASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 AL355306.1-201ENST00000415580 579 ntBASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 TIMM8BP1-201ENST00000452384 211 ntBASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 AL121761.2-201ENST00000598007 1648 ntBASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.51■□□□□ 0.55
SRGAP2CP0DJJ0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 AC060834.1-201ENST00000443027 2032 ntBASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 KRT18P28-201ENST00000453838 1332 ntBASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 AC004461.1-201ENST00000412461 403 ntBASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 MIR4492-201ENST00000581627 80 ntBASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 CYP2A7P1-201ENST00000595391 815 ntBASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 AL513210.1-201ENST00000629608 234 ntBASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 PCDHB17P-201ENST00000539533 2393 ntBASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.5■□□□□ 0.55
SRGAP2CP0DJJ0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 RNU1-129P-201ENST00000384064 167 ntBASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 TFAMP1-201ENST00000412727 736 ntBASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 AC092474.2-201ENST00000424288 719 ntBASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 ADH5P3-201ENST00000433842 1137 ntBASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 AP000344.2-201ENST00000512987 629 ntBASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 KRT8P48-201ENST00000515599 1220 ntBASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 U1.21-201ENST00000580816 167 ntBASIC18.49■□□□□ 0.55
SRGAP2CP0DJJ0 AC022145.2-201ENST00000598203 171 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms