Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 AGGF1P2-201ENST00000426656 2106 ntBASIC15.29■□□□□ 0.04
FREM3P0C091 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.29■□□□□ 0.04
FREM3P0C091 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.29■□□□□ 0.04
FREM3P0C091 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.29■□□□□ 0.04
FREM3P0C091 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.29■□□□□ 0.04
FREM3P0C091 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.29■□□□□ 0.04
FREM3P0C091 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.29■□□□□ 0.04
FREM3P0C091 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.29■□□□□ 0.04
FREM3P0C091 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.29■□□□□ 0.04
FREM3P0C091 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FREM3P0C091 FLJ38576-201ENST00000623820 2459 ntBASIC15.29■□□□□ 0.04
FREM3P0C091 RNF216P1-203ENST00000404404 2427 ntBASIC15.29■□□□□ 0.04
FREM3P0C091 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.29■□□□□ 0.04
FREM3P0C091 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.29■□□□□ 0.04
FREM3P0C091 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FREM3P0C091 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
FREM3P0C091 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
FREM3P0C091 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.28■□□□□ 0.04
FREM3P0C091 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.28■□□□□ 0.04
FREM3P0C091 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FREM3P0C091 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FREM3P0C091 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 TFAMP1-201ENST00000412727 736 ntBASIC15.28■□□□□ 0.04
FREM3P0C091 FAM58CP-201ENST00000435741 640 ntBASIC15.28■□□□□ 0.04
FREM3P0C091 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.28■□□□□ 0.04
FREM3P0C091 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.28■□□□□ 0.04
FREM3P0C091 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.28■□□□□ 0.04
FREM3P0C091 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
FREM3P0C091 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.28■□□□□ 0.04
FREM3P0C091 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
FREM3P0C091 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.28■□□□□ 0.04
FREM3P0C091 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.28■□□□□ 0.04
FREM3P0C091 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
FREM3P0C091 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
FREM3P0C091 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
FREM3P0C091 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.27■□□□□ 0.04
FREM3P0C091 AC124067.4-201ENST00000519691 2379 ntBASIC15.27■□□□□ 0.04
FREM3P0C091 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.27■□□□□ 0.04
FREM3P0C091 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
FREM3P0C091 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.27■□□□□ 0.04
FREM3P0C091 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.27■□□□□ 0.04
FREM3P0C091 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.27■□□□□ 0.04
FREM3P0C091 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.27■□□□□ 0.04
FREM3P0C091 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
FREM3P0C091 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
FREM3P0C091 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.27■□□□□ 0.04
FREM3P0C091 AC091812.2-201ENST00000619081 385 ntBASIC15.27■□□□□ 0.04
FREM3P0C091 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FREM3P0C091 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM3P0C091 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM3P0C091 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.27■□□□□ 0.03
FREM3P0C091 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM3P0C091 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms