Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ACTG1P4-201ENST00000425123 1122 ntBASIC16.96■□□□□ 0.31
RFPL1O75677 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.96■□□□□ 0.31
RFPL1O75677 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.96■□□□□ 0.31
RFPL1O75677 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.96■□□□□ 0.31
RFPL1O75677 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.96■□□□□ 0.31
RFPL1O75677 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.96■□□□□ 0.31
RFPL1O75677 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.96■□□□□ 0.31
RFPL1O75677 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.96■□□□□ 0.31
RFPL1O75677 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.96■□□□□ 0.31
RFPL1O75677 TP73-AS1-207ENST00000624167 988 ntBASIC16.96■□□□□ 0.31
RFPL1O75677 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.96■□□□□ 0.31
RFPL1O75677 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFPL1O75677 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFPL1O75677 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFPL1O75677 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFPL1O75677 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFPL1O75677 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFPL1O75677 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFPL1O75677 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFPL1O75677 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.96■□□□□ 0.3
RFPL1O75677 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.96■□□□□ 0.3
RFPL1O75677 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFPL1O75677 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFPL1O75677 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
RFPL1O75677 LINC00895-201ENST00000629028 1637 ntBASIC16.96■□□□□ 0.3
RFPL1O75677 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFPL1O75677 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.95■□□□□ 0.3
RFPL1O75677 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFPL1O75677 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.95■□□□□ 0.3
RFPL1O75677 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFPL1O75677 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFPL1O75677 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.95■□□□□ 0.3
RFPL1O75677 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.95■□□□□ 0.3
RFPL1O75677 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RFPL1O75677 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.95■□□□□ 0.3
RFPL1O75677 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RFPL1O75677 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFPL1O75677 FAM197Y8-203ENST00000450145 560 ntBASIC16.95■□□□□ 0.3
RFPL1O75677 AF186996.4-201ENST00000467186 377 ntBASIC16.95■□□□□ 0.3
RFPL1O75677 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.95■□□□□ 0.3
RFPL1O75677 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.95■□□□□ 0.3
RFPL1O75677 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.95■□□□□ 0.3
RFPL1O75677 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RFPL1O75677 AL591684.3-201ENST00000605187 298 ntBASIC16.95■□□□□ 0.3
RFPL1O75677 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFPL1O75677 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 AC132872.4-202ENST00000622924 2756 ntBASIC16.95■□□□□ 0.3
RFPL1O75677 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RFPL1O75677 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
RFPL1O75677 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RFPL1O75677 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFPL1O75677 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFPL1O75677 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.95■□□□□ 0.3
RFPL1O75677 IL9RP2-201ENST00000423948 1312 ntBASIC16.95■□□□□ 0.3
RFPL1O75677 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 AC006538.1-201ENST00000567905 1585 ntBASIC16.94■□□□□ 0.3
RFPL1O75677 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.94■□□□□ 0.3
RFPL1O75677 AP002414.1-201ENST00000391405 1147 ntBASIC16.94■□□□□ 0.3
RFPL1O75677 KRT18P13-201ENST00000400056 1290 ntBASIC16.94■□□□□ 0.3
RFPL1O75677 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.94■□□□□ 0.3
RFPL1O75677 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.94■□□□□ 0.3
RFPL1O75677 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RFPL1O75677 AL671883.3-201ENST00000603274 991 ntBASIC16.94■□□□□ 0.3
RFPL1O75677 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.94■□□□□ 0.3
RFPL1O75677 AF228730.7-201ENST00000641842 219 ntBASIC16.94■□□□□ 0.3
RFPL1O75677 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFPL1O75677 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.94■□□□□ 0.3
RFPL1O75677 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms