Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PDCD6O75340 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.28□□□□□ -0.12
PDCD6O75340 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PDCD6O75340 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.28□□□□□ -0.12
PDCD6O75340 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.28□□□□□ -0.12
PDCD6O75340 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.28□□□□□ -0.12
PDCD6O75340 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.28□□□□□ -0.12
PDCD6O75340 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.28□□□□□ -0.12
PDCD6O75340 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
PDCD6O75340 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PDCD6O75340 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.28□□□□□ -0.12
PDCD6O75340 ALOX12P2-203ENST00000570921 1945 ntBASIC14.28□□□□□ -0.12
PDCD6O75340 MIR5100-201ENST00000579544 119 ntBASIC14.28□□□□□ -0.12
PDCD6O75340 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 MIR3180-1-201ENST00000580374 94 ntBASIC14.28□□□□□ -0.12
PDCD6O75340 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.28□□□□□ -0.12
PDCD6O75340 MIR3180-3-201ENST00000584616 94 ntBASIC14.28□□□□□ -0.12
PDCD6O75340 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PDCD6O75340 AC092364.2-201ENST00000596710 2692 ntBASIC14.28□□□□□ -0.12
PDCD6O75340 AC099336.1-202ENST00000602961 463 ntBASIC14.28□□□□□ -0.12
PDCD6O75340 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.28□□□□□ -0.12
PDCD6O75340 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 AL139011.1-202ENST00000642063 584 ntBASIC14.28□□□□□ -0.12
PDCD6O75340 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PDCD6O75340 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDCD6O75340 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.27□□□□□ -0.12
PDCD6O75340 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.27□□□□□ -0.12
PDCD6O75340 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
PDCD6O75340 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PDCD6O75340 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PDCD6O75340 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
PDCD6O75340 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PDCD6O75340 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PDCD6O75340 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDCD6O75340 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 NUS1P2-201ENST00000417358 873 ntBASIC14.27□□□□□ -0.13
PDCD6O75340 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.27□□□□□ -0.13
PDCD6O75340 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
PDCD6O75340 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.27□□□□□ -0.13
PDCD6O75340 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PDCD6O75340 TERC-201ENST00000602385 541 ntBASIC14.27□□□□□ -0.13
PDCD6O75340 AC013467.2-201ENST00000605472 835 ntBASIC14.27□□□□□ -0.13
PDCD6O75340 AL353135.1-201ENST00000606729 504 ntBASIC14.27□□□□□ -0.13
PDCD6O75340 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.27□□□□□ -0.13
PDCD6O75340 AL590326.2-201ENST00000625139 305 ntBASIC14.27□□□□□ -0.13
PDCD6O75340 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.27□□□□□ -0.13
PDCD6O75340 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.27□□□□□ -0.13
PDCD6O75340 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDCD6O75340 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.27□□□□□ -0.13
PDCD6O75340 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDCD6O75340 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDCD6O75340 AC006277.1-201ENST00000624348 1610 ntBASIC14.26□□□□□ -0.13
PDCD6O75340 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.26□□□□□ -0.13
PDCD6O75340 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDCD6O75340 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PDCD6O75340 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.26□□□□□ -0.13
PDCD6O75340 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDCD6O75340 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.26□□□□□ -0.13
PDCD6O75340 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.26□□□□□ -0.13
PDCD6O75340 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.26□□□□□ -0.13
PDCD6O75340 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.26□□□□□ -0.13
PDCD6O75340 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDCD6O75340 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDCD6O75340 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDCD6O75340 AL590787.1-201ENST00000568856 1315 ntBASIC14.26□□□□□ -0.13
PDCD6O75340 ME2P1-201ENST00000426028 1970 ntBASIC14.26□□□□□ -0.13
PDCD6O75340 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDCD6O75340 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDCD6O75340 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.26□□□□□ -0.13
PDCD6O75340 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms