Protein–RNA interactions for Protein: O60784

TOM1, Target of Myb protein 1, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1O60784 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TOM1O60784 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.23
TOM1O60784 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TOM1O60784 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 AL355334.1-201ENST00000417713 215 ntBASIC22.7■■□□□ 1.22
TOM1O60784 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC22.7■■□□□ 1.22
TOM1O60784 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TOM1O60784 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC22.7■■□□□ 1.22
TOM1O60784 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC22.7■■□□□ 1.22
TOM1O60784 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC22.7■■□□□ 1.22
TOM1O60784 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC22.7■■□□□ 1.22
TOM1O60784 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC22.7■■□□□ 1.22
TOM1O60784 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC22.7■■□□□ 1.22
TOM1O60784 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC22.7■■□□□ 1.22
TOM1O60784 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC22.7■■□□□ 1.22
TOM1O60784 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC22.7■■□□□ 1.22
TOM1O60784 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC22.7■■□□□ 1.22
TOM1O60784 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC22.7■■□□□ 1.22
TOM1O60784 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TOM1O60784 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.7■■□□□ 1.22
TOM1O60784 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
TOM1O60784 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TOM1O60784 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
TOM1O60784 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 AC005332.7-201ENST00000614046 2005 ntBASIC22.69■■□□□ 1.22
TOM1O60784 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TOM1O60784 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC22.69■■□□□ 1.22
TOM1O60784 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TOM1O60784 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.69■■□□□ 1.22
TOM1O60784 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC22.69■■□□□ 1.22
TOM1O60784 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 HNRNPA1P48-201ENST00000562726 1377 ntBASIC22.69■■□□□ 1.22
TOM1O60784 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
TOM1O60784 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC22.69■■□□□ 1.22
TOM1O60784 AC004898.1-201ENST00000451057 766 ntBASIC22.69■■□□□ 1.22
TOM1O60784 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC22.69■■□□□ 1.22
TOM1O60784 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 ENPP7P5-201ENST00000541031 1031 ntBASIC22.69■■□□□ 1.22
TOM1O60784 AC024267.1-201ENST00000582320 895 ntBASIC22.69■■□□□ 1.22
TOM1O60784 AC020914.3-201ENST00000594712 304 ntBASIC22.69■■□□□ 1.22
TOM1O60784 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC22.69■■□□□ 1.22
TOM1O60784 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
TOM1O60784 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TOM1O60784 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.69■■□□□ 1.22
TOM1O60784 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TOM1O60784 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC22.68■■□□□ 1.22
TOM1O60784 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC22.68■■□□□ 1.22
TOM1O60784 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
TOM1O60784 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
TOM1O60784 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC22.68■■□□□ 1.22
TOM1O60784 KRT18P55-202ENST00000578578 1546 ntBASIC22.68■■□□□ 1.22
TOM1O60784 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.68■■□□□ 1.22
TOM1O60784 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC22.68■■□□□ 1.22
TOM1O60784 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC22.68■■□□□ 1.22
TOM1O60784 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC22.68■■□□□ 1.22
TOM1O60784 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC22.68■■□□□ 1.22
TOM1O60784 CHMP4BP1-201ENST00000556017 588 ntBASIC22.68■■□□□ 1.22
TOM1O60784 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC22.68■■□□□ 1.22
TOM1O60784 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC22.68■■□□□ 1.22
TOM1O60784 AC138627.1-207ENST00000641560 1006 ntBASIC22.68■■□□□ 1.22
TOM1O60784 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC22.68■■□□□ 1.22
TOM1O60784 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.68■■□□□ 1.22
TOM1O60784 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
TOM1O60784 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TOM1O60784 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TOM1O60784 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TOM1O60784 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms