Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CLEC4GP1-201ENST00000596555 870 ntBASIC18.93■□□□□ 0.62
ACTN4O43707 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.93■□□□□ 0.62
ACTN4O43707 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.93■□□□□ 0.62
ACTN4O43707 AL805961.1-202ENST00000641562 540 ntBASIC18.93■□□□□ 0.62
ACTN4O43707 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ACTN4O43707 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.93■□□□□ 0.62
ACTN4O43707 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.93■□□□□ 0.62
ACTN4O43707 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.93■□□□□ 0.62
ACTN4O43707 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.93■□□□□ 0.62
ACTN4O43707 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ACTN4O43707 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ACTN4O43707 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ACTN4O43707 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.92■□□□□ 0.62
ACTN4O43707 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.92■□□□□ 0.62
ACTN4O43707 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.92■□□□□ 0.62
ACTN4O43707 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ACTN4O43707 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.92■□□□□ 0.62
ACTN4O43707 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.92■□□□□ 0.62
ACTN4O43707 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.92■□□□□ 0.62
ACTN4O43707 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ACTN4O43707 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.92■□□□□ 0.62
ACTN4O43707 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ACTN4O43707 AC107918.4-202ENST00000641623 219 ntBASIC18.92■□□□□ 0.62
ACTN4O43707 AF228730.7-201ENST00000641842 219 ntBASIC18.92■□□□□ 0.62
ACTN4O43707 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ACTN4O43707 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.92■□□□□ 0.62
ACTN4O43707 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.92■□□□□ 0.62
ACTN4O43707 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ACTN4O43707 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ACTN4O43707 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACTN4O43707 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ACTN4O43707 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.91■□□□□ 0.62
ACTN4O43707 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ACTN4O43707 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ACTN4O43707 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.91■□□□□ 0.62
ACTN4O43707 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.91■□□□□ 0.62
ACTN4O43707 LAGE3P1-201ENST00000425356 484 ntBASIC18.91■□□□□ 0.62
ACTN4O43707 KRT18P27-201ENST00000427733 1299 ntBASIC18.91■□□□□ 0.62
ACTN4O43707 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.91■□□□□ 0.62
ACTN4O43707 UNC93B7-201ENST00000509439 705 ntBASIC18.91■□□□□ 0.62
ACTN4O43707 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.91■□□□□ 0.62
ACTN4O43707 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.91■□□□□ 0.62
ACTN4O43707 IFNL4P1-201ENST00000607083 540 ntBASIC18.91■□□□□ 0.62
ACTN4O43707 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.91■□□□□ 0.62
ACTN4O43707 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.91■□□□□ 0.62
ACTN4O43707 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.91■□□□□ 0.62
ACTN4O43707 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.91■□□□□ 0.62
ACTN4O43707 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.91■□□□□ 0.62
ACTN4O43707 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ACTN4O43707 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ACTN4O43707 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ACTN4O43707 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.91■□□□□ 0.62
ACTN4O43707 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ACTN4O43707 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 AL671710.1-201ENST00000610245 2349 ntBASIC18.9■□□□□ 0.62
ACTN4O43707 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.9■□□□□ 0.62
ACTN4O43707 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
ACTN4O43707 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.9■□□□□ 0.62
ACTN4O43707 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
ACTN4O43707 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.9■□□□□ 0.62
ACTN4O43707 AC107918.2-201ENST00000530817 355 ntBASIC18.9■□□□□ 0.62
ACTN4O43707 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.9■□□□□ 0.62
ACTN4O43707 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
ACTN4O43707 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms