Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.42■□□□□ 0.38
TRANK1O15050 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRANK1O15050 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRANK1O15050 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
TRANK1O15050 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.42■□□□□ 0.38
TRANK1O15050 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRANK1O15050 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.42■□□□□ 0.38
TRANK1O15050 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.42■□□□□ 0.38
TRANK1O15050 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.42■□□□□ 0.38
TRANK1O15050 RPL7P3-201ENST00000441388 714 ntBASIC17.42■□□□□ 0.38
TRANK1O15050 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.42■□□□□ 0.38
TRANK1O15050 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.42■□□□□ 0.38
TRANK1O15050 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.42■□□□□ 0.38
TRANK1O15050 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 AC090164.3-201ENST00000610780 2143 ntBASIC17.42■□□□□ 0.38
TRANK1O15050 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRANK1O15050 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRANK1O15050 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.41■□□□□ 0.38
TRANK1O15050 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.41■□□□□ 0.38
TRANK1O15050 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.41■□□□□ 0.38
TRANK1O15050 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.41■□□□□ 0.38
TRANK1O15050 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
TRANK1O15050 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.41■□□□□ 0.38
TRANK1O15050 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 AC005229.1-201ENST00000392885 409 ntBASIC17.41■□□□□ 0.38
TRANK1O15050 BRWD1P1-201ENST00000401091 371 ntBASIC17.41■□□□□ 0.38
TRANK1O15050 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TRANK1O15050 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.41■□□□□ 0.38
TRANK1O15050 AL589987.1-201ENST00000453380 819 ntBASIC17.41■□□□□ 0.38
TRANK1O15050 AC098859.1-201ENST00000502915 1238 ntBASIC17.41■□□□□ 0.38
TRANK1O15050 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.41■□□□□ 0.38
TRANK1O15050 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.41■□□□□ 0.38
TRANK1O15050 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TRANK1O15050 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.41■□□□□ 0.38
TRANK1O15050 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.41■□□□□ 0.38
TRANK1O15050 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.41■□□□□ 0.38
TRANK1O15050 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRANK1O15050 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.41■□□□□ 0.38
TRANK1O15050 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.41■□□□□ 0.38
TRANK1O15050 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.41■□□□□ 0.38
TRANK1O15050 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRANK1O15050 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
TRANK1O15050 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRANK1O15050 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.41■□□□□ 0.38
TRANK1O15050 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.41■□□□□ 0.38
TRANK1O15050 AC243960.2-201ENST00000600996 747 ntBASIC17.41■□□□□ 0.38
TRANK1O15050 AC093525.9-201ENST00000624961 1746 ntBASIC17.4■□□□□ 0.38
TRANK1O15050 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.4■□□□□ 0.38
TRANK1O15050 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.4■□□□□ 0.38
TRANK1O15050 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRANK1O15050 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.4■□□□□ 0.38
TRANK1O15050 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.4■□□□□ 0.38
TRANK1O15050 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.4■□□□□ 0.38
TRANK1O15050 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.4■□□□□ 0.38
TRANK1O15050 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.4■□□□□ 0.38
TRANK1O15050 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.4■□□□□ 0.38
TRANK1O15050 ABALON-201ENST00000629058 1903 ntBASIC17.4■□□□□ 0.38
TRANK1O15050 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 AC093525.8-201ENST00000624099 1342 ntBASIC17.4■□□□□ 0.38
TRANK1O15050 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRANK1O15050 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.4■□□□□ 0.38
TRANK1O15050 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.4■□□□□ 0.38
TRANK1O15050 CTBP2P5-201ENST00000454986 1264 ntBASIC17.4■□□□□ 0.38
TRANK1O15050 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms