Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TSPAN4O14817 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TSPAN4O14817 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TSPAN4O14817 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TSPAN4O14817 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.27□□□□□ -0.12
TSPAN4O14817 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TSPAN4O14817 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
TSPAN4O14817 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TSPAN4O14817 CCR12P-201ENST00000446203 998 ntBASIC14.27□□□□□ -0.13
TSPAN4O14817 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TSPAN4O14817 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TSPAN4O14817 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TSPAN4O14817 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TSPAN4O14817 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TSPAN4O14817 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TSPAN4O14817 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TSPAN4O14817 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TSPAN4O14817 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
TSPAN4O14817 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TSPAN4O14817 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TSPAN4O14817 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TSPAN4O14817 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.27□□□□□ -0.13
TSPAN4O14817 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TSPAN4O14817 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TSPAN4O14817 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TSPAN4O14817 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TSPAN4O14817 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TSPAN4O14817 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.27□□□□□ -0.13
TSPAN4O14817 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.26□□□□□ -0.13
TSPAN4O14817 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.26□□□□□ -0.13
TSPAN4O14817 AC060834.1-201ENST00000443027 2032 ntBASIC14.26□□□□□ -0.13
TSPAN4O14817 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 AC100803.2-201ENST00000562459 1963 ntBASIC14.26□□□□□ -0.13
TSPAN4O14817 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TSPAN4O14817 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.26□□□□□ -0.13
TSPAN4O14817 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.26□□□□□ -0.13
TSPAN4O14817 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.26□□□□□ -0.13
TSPAN4O14817 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TSPAN4O14817 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TSPAN4O14817 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.26□□□□□ -0.13
TSPAN4O14817 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TSPAN4O14817 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TSPAN4O14817 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.26□□□□□ -0.13
TSPAN4O14817 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.26□□□□□ -0.13
TSPAN4O14817 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.25□□□□□ -0.13
TSPAN4O14817 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TSPAN4O14817 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TSPAN4O14817 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.25□□□□□ -0.13
TSPAN4O14817 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TSPAN4O14817 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TSPAN4O14817 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TSPAN4O14817 KRT8P3-201ENST00000519669 1449 ntBASIC14.25□□□□□ -0.13
TSPAN4O14817 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.25□□□□□ -0.13
TSPAN4O14817 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TSPAN4O14817 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TSPAN4O14817 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TSPAN4O14817 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.25□□□□□ -0.13
TSPAN4O14817 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.25□□□□□ -0.13
TSPAN4O14817 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TSPAN4O14817 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.25□□□□□ -0.13
TSPAN4O14817 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
TSPAN4O14817 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TSPAN4O14817 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
TSPAN4O14817 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TSPAN4O14817 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TSPAN4O14817 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TSPAN4O14817 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms