Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CHD1O14646 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHD1O14646 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHD1O14646 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHD1O14646 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC26.75■■□□□ 1.87
CHD1O14646 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CHD1O14646 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
CHD1O14646 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC26.75■■□□□ 1.87
CHD1O14646 AC093724.1-201ENST00000448659 1027 ntBASIC26.75■■□□□ 1.87
CHD1O14646 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC26.75■■□□□ 1.87
CHD1O14646 AC036164.1-201ENST00000570544 333 ntBASIC26.75■■□□□ 1.87
CHD1O14646 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC26.75■■□□□ 1.87
CHD1O14646 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHD1O14646 FRMD8P1-201ENST00000440433 1524 ntBASIC26.75■■□□□ 1.87
CHD1O14646 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC26.74■■□□□ 1.87
CHD1O14646 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC26.74■■□□□ 1.87
CHD1O14646 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHD1O14646 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
CHD1O14646 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
CHD1O14646 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC26.74■■□□□ 1.87
CHD1O14646 AC026954.1-201ENST00000429771 1293 ntBASIC26.74■■□□□ 1.87
CHD1O14646 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC26.74■■□□□ 1.87
CHD1O14646 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC26.74■■□□□ 1.87
CHD1O14646 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC26.74■■□□□ 1.87
CHD1O14646 PC-204ENST00000524491 1714 ntTSL 2 BASIC26.74■■□□□ 1.87
CHD1O14646 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC26.74■■□□□ 1.87
CHD1O14646 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC26.74■■□□□ 1.87
CHD1O14646 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CHD1O14646 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC26.74■■□□□ 1.87
CHD1O14646 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHD1O14646 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHD1O14646 APOA1-205ENST00000375329 927 ntTSL 2 BASIC26.73■■□□□ 1.87
CHD1O14646 ACTG1P3-201ENST00000431775 1114 ntBASIC26.73■■□□□ 1.87
CHD1O14646 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC26.73■■□□□ 1.87
CHD1O14646 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
CHD1O14646 KC6-205ENST00000599934 556 ntTSL 4 BASIC26.73■■□□□ 1.87
CHD1O14646 PRKN-211ENST00000615065 261 ntTSL 5 BASIC26.73■■□□□ 1.87
CHD1O14646 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.73■■□□□ 1.87
CHD1O14646 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHD1O14646 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CHD1O14646 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHD1O14646 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CHD1O14646 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
CHD1O14646 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHD1O14646 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
CHD1O14646 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC26.73■■□□□ 1.87
CHD1O14646 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CHD1O14646 AL355864.2-201ENST00000447420 863 ntBASIC26.73■■□□□ 1.87
CHD1O14646 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
CHD1O14646 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC26.73■■□□□ 1.87
CHD1O14646 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
CHD1O14646 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CHD1O14646 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHD1O14646 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHD1O14646 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHD1O14646 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHD1O14646 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CHD1O14646 LDHBP1-201ENST00000455730 1119 ntBASIC26.72■■□□□ 1.87
CHD1O14646 AP001889.1-201ENST00000525414 633 ntBASIC26.72■■□□□ 1.87
CHD1O14646 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC26.72■■□□□ 1.87
CHD1O14646 ATF5-205ENST00000600336 682 ntTSL 2 BASIC26.72■■□□□ 1.87
CHD1O14646 AC005695.3-201ENST00000614522 232 ntBASIC26.72■■□□□ 1.87
CHD1O14646 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CHD1O14646 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CHD1O14646 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHD1O14646 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CHD1O14646 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC26.71■■□□□ 1.87
CHD1O14646 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CHD1O14646 MIR326-201ENST00000362220 95 ntBASIC26.71■■□□□ 1.87
CHD1O14646 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC26.71■■□□□ 1.87
CHD1O14646 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CHD1O14646 RPS2P36-201ENST00000456516 831 ntBASIC26.71■■□□□ 1.87
CHD1O14646 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC26.71■■□□□ 1.87
CHD1O14646 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
CHD1O14646 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC26.71■■□□□ 1.87
CHD1O14646 AL049840.4-201ENST00000602422 811 ntBASIC26.71■■□□□ 1.87
CHD1O14646 AC026979.3-201ENST00000607315 403 ntBASIC26.71■■□□□ 1.87
CHD1O14646 RHOXF1P1-202ENST00000635473 501 ntBASIC26.71■■□□□ 1.87
CHD1O14646 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC26.71■■□□□ 1.87
CHD1O14646 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHD1O14646 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHD1O14646 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CHD1O14646 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC26.71■■□□□ 1.87
CHD1O14646 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC26.71■■□□□ 1.87
CHD1O14646 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CHD1O14646 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
CHD1O14646 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CHD1O14646 MIR4706-201ENST00000582134 82 ntBASIC26.7■■□□□ 1.87
CHD1O14646 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
CHD1O14646 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC26.7■■□□□ 1.87
CHD1O14646 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CHD1O14646 AC108860.2-201ENST00000562760 2183 ntBASIC26.7■■□□□ 1.87
CHD1O14646 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
CHD1O14646 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC26.7■■□□□ 1.86
CHD1O14646 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHD1O14646 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC26.7■■□□□ 1.86
CHD1O14646 PTP4A1P2-201ENST00000546033 454 ntBASIC26.7■■□□□ 1.86
CHD1O14646 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC26.7■■□□□ 1.86
CHD1O14646 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC26.7■■□□□ 1.86
CHD1O14646 MIR4722-201ENST00000578292 60 ntBASIC26.7■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms