Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC016734.2-201ENST00000624325 1377 ntBASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM49D1C9J1S8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 AC097637.2-201ENST00000624096 1997 ntBASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 MTHFR-217ENST00000641820 1569 ntBASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 AP002414.1-201ENST00000391405 1147 ntBASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 AC096582.2-201ENST00000510860 516 ntBASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 RN7SL850P-201ENST00000579959 291 ntBASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM49D1C9J1S8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 RCN1P2-201ENST00000398357 915 ntBASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 MINOS1P3-201ENST00000457048 203 ntBASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 BNIP3P18-201ENST00000593976 575 ntBASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 KRT18P1-202ENST00000452408 1331 ntBASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM49D1C9J1S8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM49D1C9J1S8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms