Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SRRM3A6NNA2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 KRT18P3-201ENST00000451602 1288 ntBASIC17.53■□□□□ 0.4
SRRM3A6NNA2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 COX20P2-201ENST00000452636 358 ntBASIC17.53■□□□□ 0.4
SRRM3A6NNA2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 GUSBP12-201ENST00000513727 720 ntBASIC17.53■□□□□ 0.4
SRRM3A6NNA2 IGHV3-22-201ENST00000520721 359 ntBASIC17.53■□□□□ 0.4
SRRM3A6NNA2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 AC040169.1-201ENST00000565382 521 ntBASIC17.53■□□□□ 0.4
SRRM3A6NNA2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SRRM3A6NNA2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.52■□□□□ 0.4
SRRM3A6NNA2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM3A6NNA2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SRRM3A6NNA2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms