Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 KRT18P31-201ENST00000506277 1292 ntBASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 AL589182.2-201ENST00000619332 1049 ntBASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 AL355877.3-201ENST00000622820 899 ntBASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV7S3A2A0A539 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 AC004706.3-202ENST00000621574 984 ntBASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 AL512652.2-201ENST00000625156 1716 ntBASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 AL162727.3-201ENST00000635661 2787 ntBASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 TOP3BP1-201ENST00000420768 1380 ntBASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.15■□□□□ 0.34
TCRBV7S3A2A0A539 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
TCRBV7S3A2A0A539 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 PTCHD3P3-201ENST00000403073 906 ntBASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 MIR1224-201ENST00000408193 85 ntBASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 MIR3652-201ENST00000579335 131 ntBASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 MTDHP4-201ENST00000600287 670 ntBASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 AL139011.1-202ENST00000642063 584 ntBASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV7S3A2A0A539 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms