Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1LQ9UNN4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
GTF2A1LQ9UNN4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1LQ9UNN4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1LQ9UNN4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1LQ9UNN4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
GTF2A1LQ9UNN4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 RN7SL606P-201ENST00000472779 293 ntBASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 DUX4L26-201ENST00000489078 1255 ntBASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 AL603756.1-201ENST00000606511 2163 ntBASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1LQ9UNN4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 AC078925.2-201ENST00000624013 1973 ntBASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 KLF4P1-201ENST00000412782 1185 ntBASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 STK25P1-201ENST00000585406 838 ntBASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 AL662844.4-201ENST00000606367 2838 ntBASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1LQ9UNN4 AL135999.2-201ENST00000622438 1686 ntBASIC15.12■□□□□ 0.01
GTF2A1LQ9UNN4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.12■□□□□ 0.01
GTF2A1LQ9UNN4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1LQ9UNN4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1LQ9UNN4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.12■□□□□ 0.01
GTF2A1LQ9UNN4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1LQ9UNN4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GTF2A1LQ9UNN4 DOC2GP-204ENST00000639052 2548 ntBASIC15.12■□□□□ 0.01
GTF2A1LQ9UNN4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1LQ9UNN4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms