Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 AP000344.2-201ENST00000512987 629 ntBASIC17.79■□□□□ 0.44
CDH9Q9ULB4 RARRES2P8-201ENST00000566335 367 ntBASIC17.79■□□□□ 0.44
CDH9Q9ULB4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.79■□□□□ 0.44
CDH9Q9ULB4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 AC026120.1-201ENST00000611536 926 ntBASIC17.79■□□□□ 0.44
CDH9Q9ULB4 AC105339.1-204ENST00000636249 355 ntBASIC17.79■□□□□ 0.44
CDH9Q9ULB4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH9Q9ULB4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 AKAP8P1-201ENST00000434743 1349 ntBASIC17.78■□□□□ 0.44
CDH9Q9ULB4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 CNN2P11-201ENST00000429351 262 ntBASIC17.78■□□□□ 0.44
CDH9Q9ULB4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 AC021097.1-201ENST00000607902 574 ntBASIC17.78■□□□□ 0.44
CDH9Q9ULB4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 AL513210.1-201ENST00000629608 234 ntBASIC17.78■□□□□ 0.44
CDH9Q9ULB4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH9Q9ULB4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 TFAMP1-201ENST00000412727 736 ntBASIC17.77■□□□□ 0.44
CDH9Q9ULB4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 AC092183.1-201ENST00000469884 875 ntBASIC17.77■□□□□ 0.44
CDH9Q9ULB4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms