Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 AL031284.1-201ENST00000419297 478 ntBASIC15.41■□□□□ 0.06
EMC3Q9P0I2 AC009078.2-202ENST00000463353 338 ntBASIC15.41■□□□□ 0.06
EMC3Q9P0I2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 UBALD1-205ENST00000590891 2641 ntBASIC15.41■□□□□ 0.06
EMC3Q9P0I2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EMC3Q9P0I2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 CROCCP2-202ENST00000412962 2773 ntBASIC15.4■□□□□ 0.06
EMC3Q9P0I2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 LINC00982-205ENST00000420957 435 ntBASIC15.4■□□□□ 0.06
EMC3Q9P0I2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 SLC25A6P4-201ENST00000586535 553 ntBASIC15.4■□□□□ 0.06
EMC3Q9P0I2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 AC008735.5-201ENST00000623544 497 ntBASIC15.4■□□□□ 0.06
EMC3Q9P0I2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.4■□□□□ 0.06
EMC3Q9P0I2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 MRPL3P1-201ENST00000400109 1033 ntBASIC15.39■□□□□ 0.05
EMC3Q9P0I2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.39■□□□□ 0.05
EMC3Q9P0I2 AGGF1P2-201ENST00000426656 2106 ntBASIC15.39■□□□□ 0.05
EMC3Q9P0I2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms