Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 HMGA1P7-201ENST00000406908 502 ntBASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 AL671883.3-201ENST00000603274 991 ntBASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 AC023141.13-201ENST00000604991 943 ntBASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 AC004877.2-201ENST00000623941 599 ntBASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 HLA-A-202ENST00000376806 1854 ntBASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ECHDC1Q9NTX5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 KRT18P58-201ENST00000527480 1120 ntBASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 AC007064.4-201ENST00000637740 555 ntBASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ECHDC1Q9NTX5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.52■□□□□ 0.87
ECHDC1Q9NTX5 AC025580.3-201ENST00000617932 1424 ntBASIC20.52■□□□□ 0.87
ECHDC1Q9NTX5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.52■□□□□ 0.87
ECHDC1Q9NTX5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ECHDC1Q9NTX5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
ECHDC1Q9NTX5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
ECHDC1Q9NTX5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 AC006538.1-201ENST00000567905 1585 ntBASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 HLA-J-202ENST00000469281 1241 ntBASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 KRT19P2-202ENST00000557173 1012 ntBASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 AL031432.2-201ENST00000566714 459 ntBASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 AL928711.1-201ENST00000570165 459 ntBASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 AC092171.3-201ENST00000610122 2651 ntBASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 BCAR1-209ENST00000546196 1340 ntBASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ECHDC1Q9NTX5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms