Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 AC009118.2-201ENST00000613275 655 ntBASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 AP001094.4-201ENST00000579008 2176 ntBASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 AC092068.3-201ENST00000587894 2016 ntBASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 ATP5G2P4-201ENST00000442175 420 ntBASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 AC005412.3-201ENST00000580309 715 ntBASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM7Q9NR12 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 AC022494.1-201ENST00000466044 728 ntBASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 MIR4492-201ENST00000581627 80 ntBASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.74■□□□□ 0.59
PDLIM7Q9NR12 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM7Q9NR12 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms