Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 AP002414.3-201ENST00000589352 1468 ntBASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 AC116407.3-201ENST00000623905 1129 ntBASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NECTIN3Q9NQS3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 AC103702.1-201ENST00000548801 2630 ntBASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 KRT18P27-201ENST00000427733 1299 ntBASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 AC093909.1-201ENST00000504731 1122 ntBASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 AC105339.3-201ENST00000560043 636 ntBASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 AL353135.1-201ENST00000606729 504 ntBASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NECTIN3Q9NQS3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 AC006504.4-201ENST00000592118 1568 ntBASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 AC073621.1-201ENST00000392730 636 ntBASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 ACTG1P4-201ENST00000425123 1122 ntBASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 AC092910.1-201ENST00000482027 1129 ntBASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms