Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 CNN2P2-201ENST00000443536 909 ntBASIC19.62■□□□□ 0.73
SH2D4AQ9H788 CNN2P3-201ENST00000450201 906 ntBASIC19.62■□□□□ 0.73
SH2D4AQ9H788 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 AC124947.2-201ENST00000547118 1133 ntBASIC19.62■□□□□ 0.73
SH2D4AQ9H788 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 AL136317.3-201ENST00000618497 906 ntBASIC19.62■□□□□ 0.73
SH2D4AQ9H788 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.62■□□□□ 0.73
SH2D4AQ9H788 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 AL512356.2-201ENST00000546955 174 ntBASIC19.61■□□□□ 0.73
SH2D4AQ9H788 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 AC021097.1-201ENST00000607902 574 ntBASIC19.61■□□□□ 0.73
SH2D4AQ9H788 AC093512.1-201ENST00000617969 520 ntBASIC19.61■□□□□ 0.73
SH2D4AQ9H788 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH2D4AQ9H788 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 LINC02012-201ENST00000608206 1725 ntBASIC19.6■□□□□ 0.73
SH2D4AQ9H788 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 TUBB8P12-201ENST00000308911 1335 ntBASIC19.6■□□□□ 0.73
SH2D4AQ9H788 TUBB7P-202ENST00000428444 1305 ntBASIC19.6■□□□□ 0.73
SH2D4AQ9H788 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 TUBB8P7-204ENST00000567960 1332 ntBASIC19.6■□□□□ 0.73
SH2D4AQ9H788 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms