Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 RNA5SP415-201ENST00000517246 115 ntBASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCSER1Q9C0I3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 VN2R19P-201ENST00000442399 1052 ntBASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 AP001350.2-201ENST00000625104 1094 ntBASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCSER1Q9C0I3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 GGT3P-204ENST00000453783 1664 ntBASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 ME2P1-201ENST00000426028 1970 ntBASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCSER1Q9C0I3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 CXCL1P1-201ENST00000502804 216 ntBASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.83■□□□□ 0.6
CCSER1Q9C0I3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms