Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH11YQ9BZA8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCDH11YQ9BZA8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH11YQ9BZA8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH11YQ9BZA8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDH11YQ9BZA8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH11YQ9BZA8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH11YQ9BZA8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 AC007541.1-201ENST00000570282 1469 ntBASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 AL390961.4-201ENST00000623958 2535 ntBASIC21.66■■□□□ 1.06
PCDH11YQ9BZA8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH11YQ9BZA8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH11YQ9BZA8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDH11YQ9BZA8 BTBD7P1-201ENST00000447253 1453 ntBASIC21.64■■□□□ 1.06
PCDH11YQ9BZA8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDH11YQ9BZA8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PCDH11YQ9BZA8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH11YQ9BZA8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH11YQ9BZA8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH11YQ9BZA8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 AL353779.1-201ENST00000434793 351 ntBASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 U91328.1-201ENST00000437528 223 ntBASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 NOC2LP1-202ENST00000452600 2235 ntBASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH11YQ9BZA8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 AC135586.1-201ENST00000539323 574 ntBASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 AC104794.3-201ENST00000566840 1248 ntBASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 MIR6752-201ENST00000618442 71 ntBASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11YQ9BZA8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms