Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 AC135586.1-201ENST00000539323 574 ntBASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 AC138969.3-201ENST00000546612 1459 ntBASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 AC138932.2-201ENST00000548268 1459 ntBASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 AC126755.4-201ENST00000549796 1459 ntBASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRAMP1Q96RY5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 DFFBP1-201ENST00000433250 979 ntBASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 ATP5G2P4-201ENST00000442175 420 ntBASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CRAMP1Q96RY5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 KRT8P39-201ENST00000396270 1433 ntBASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 SNX33P1-201ENST00000592116 1762 ntBASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CRAMP1Q96RY5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CRAMP1Q96RY5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CRAMP1Q96RY5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CRAMP1Q96RY5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CRAMP1Q96RY5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CRAMP1Q96RY5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CRAMP1Q96RY5 AL391825.1-201ENST00000457671 1364 ntBASIC20.39■□□□□ 0.85
CRAMP1Q96RY5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.39■□□□□ 0.85
CRAMP1Q96RY5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.39■□□□□ 0.85
CRAMP1Q96RY5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CRAMP1Q96RY5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.39■□□□□ 0.85
CRAMP1Q96RY5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.39■□□□□ 0.85
CRAMP1Q96RY5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms