Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NLRP3Q96P20 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLRP3Q96P20 HLA-H-201ENST00000383620 1096 ntBASIC20.71■□□□□ 0.91
NLRP3Q96P20 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.71■□□□□ 0.91
NLRP3Q96P20 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.71■□□□□ 0.91
NLRP3Q96P20 PIN1P1-201ENST00000412108 996 ntBASIC20.71■□□□□ 0.91
NLRP3Q96P20 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.71■□□□□ 0.91
NLRP3Q96P20 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.71■□□□□ 0.91
NLRP3Q96P20 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.71■□□□□ 0.91
NLRP3Q96P20 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.71■□□□□ 0.91
NLRP3Q96P20 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.71■□□□□ 0.91
NLRP3Q96P20 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.71■□□□□ 0.91
NLRP3Q96P20 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRP3Q96P20 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NLRP3Q96P20 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRP3Q96P20 AC022144.1-201ENST00000602255 1580 ntBASIC20.71■□□□□ 0.91
NLRP3Q96P20 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRP3Q96P20 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRP3Q96P20 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
NLRP3Q96P20 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NLRP3Q96P20 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.7■□□□□ 0.91
NLRP3Q96P20 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
NLRP3Q96P20 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
NLRP3Q96P20 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
NLRP3Q96P20 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
NLRP3Q96P20 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NLRP3Q96P20 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.7■□□□□ 0.9
NLRP3Q96P20 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 HLA-V-204ENST00000476601 1289 ntBASIC20.7■□□□□ 0.9
NLRP3Q96P20 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.7■□□□□ 0.9
NLRP3Q96P20 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.7■□□□□ 0.9
NLRP3Q96P20 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.7■□□□□ 0.9
NLRP3Q96P20 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRP3Q96P20 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 AL358472.5-202ENST00000641448 1267 ntBASIC20.69■□□□□ 0.9
NLRP3Q96P20 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 LINC02012-201ENST00000608206 1725 ntBASIC20.69■□□□□ 0.9
NLRP3Q96P20 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.69■□□□□ 0.9
NLRP3Q96P20 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRP3Q96P20 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 GK-202ENST00000378941 458 ntTSL 3 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 AC124947.2-201ENST00000547118 1133 ntBASIC20.68■□□□□ 0.9
NLRP3Q96P20 AL662799.1-202ENST00000614205 422 ntBASIC20.68■□□□□ 0.9
NLRP3Q96P20 SPTSSB-204ENST00000617024 1292 ntBASIC20.68■□□□□ 0.9
NLRP3Q96P20 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 TUBB8P12-201ENST00000308911 1335 ntBASIC20.68■□□□□ 0.9
NLRP3Q96P20 TUBB7P-202ENST00000428444 1305 ntBASIC20.68■□□□□ 0.9
NLRP3Q96P20 TUBB8P7-204ENST00000567960 1332 ntBASIC20.68■□□□□ 0.9
NLRP3Q96P20 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRP3Q96P20 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.68■□□□□ 0.9
NLRP3Q96P20 AL035456.1-201ENST00000456064 1369 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms