Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 NFIC-211ENST00000641145 8399 ntBASIC17.46■□□□□ 0.39
IFT43Q96FT9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 ACTG1P4-201ENST00000425123 1122 ntBASIC17.46■□□□□ 0.39
IFT43Q96FT9 LAGE3P1-201ENST00000425356 484 ntBASIC17.46■□□□□ 0.39
IFT43Q96FT9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 TERC-201ENST00000602385 541 ntBASIC17.46■□□□□ 0.39
IFT43Q96FT9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IFT43Q96FT9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFT43Q96FT9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
IFT43Q96FT9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 AC092850.2-201ENST00000623821 2697 ntBASIC17.45■□□□□ 0.38
IFT43Q96FT9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 LINC00982-205ENST00000420957 435 ntBASIC17.45■□□□□ 0.38
IFT43Q96FT9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 AL591424.1-201ENST00000442569 1213 ntBASIC17.45■□□□□ 0.38
IFT43Q96FT9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 AC105339.3-201ENST00000560043 636 ntBASIC17.45■□□□□ 0.38
IFT43Q96FT9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.45■□□□□ 0.38
IFT43Q96FT9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFT43Q96FT9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.45■□□□□ 0.38
IFT43Q96FT9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 LINC02012-201ENST00000608206 1725 ntBASIC17.44■□□□□ 0.38
IFT43Q96FT9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 SLC25A1P3-201ENST00000395415 828 ntBASIC17.44■□□□□ 0.38
IFT43Q96FT9 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFT43Q96FT9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.44■□□□□ 0.38
IFT43Q96FT9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms