Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 FAM207CP-201ENST00000443486 507 ntBASIC17.11■□□□□ 0.33
CHFRQ96EP1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 AC004890.2-204ENST00000481968 304 ntBASIC17.11■□□□□ 0.33
CHFRQ96EP1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 AC069120.2-201ENST00000524091 540 ntBASIC17.11■□□□□ 0.33
CHFRQ96EP1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 CYP2A7P1-201ENST00000595391 815 ntBASIC17.11■□□□□ 0.33
CHFRQ96EP1 AP001350.2-201ENST00000625104 1094 ntBASIC17.11■□□□□ 0.33
CHFRQ96EP1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.11■□□□□ 0.33
CHFRQ96EP1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHFRQ96EP1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 KRT8P49-201ENST00000604166 1432 ntBASIC17.1■□□□□ 0.33
CHFRQ96EP1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHFRQ96EP1 AL133373.2-201ENST00000623187 2828 ntBASIC17.1■□□□□ 0.33
CHFRQ96EP1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CHFRQ96EP1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 TSSK5P-201ENST00000423978 907 ntBASIC17.09■□□□□ 0.33
CHFRQ96EP1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
CHFRQ96EP1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHFRQ96EP1 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms