Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.03■□□□□ -0
RFT1Q96AA3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.03■□□□□ -0
RFT1Q96AA3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.03■□□□□ -0
RFT1Q96AA3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.03■□□□□ -0
RFT1Q96AA3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.03■□□□□ -0
RFT1Q96AA3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 AC083849.1-201ENST00000615227 514 ntBASIC15.03■□□□□ -0
RFT1Q96AA3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.03■□□□□ -0
RFT1Q96AA3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.03■□□□□ -0
RFT1Q96AA3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.03■□□□□ -0
RFT1Q96AA3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFT1Q96AA3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RFT1Q96AA3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.03■□□□□ -0
RFT1Q96AA3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.02■□□□□ -0
RFT1Q96AA3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.02■□□□□ -0
RFT1Q96AA3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RFT1Q96AA3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RFT1Q96AA3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RFT1Q96AA3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
RFT1Q96AA3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.02■□□□□ -0
RFT1Q96AA3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RFT1Q96AA3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.02■□□□□ -0
RFT1Q96AA3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.02■□□□□ -0
RFT1Q96AA3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RFT1Q96AA3 SPDYE13P-201ENST00000445314 798 ntBASIC15.02■□□□□ -0
RFT1Q96AA3 AC104076.2-201ENST00000448912 469 ntBASIC15.02■□□□□ -0
RFT1Q96AA3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.02■□□□□ -0
RFT1Q96AA3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.02■□□□□ -0
RFT1Q96AA3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.02■□□□□ -0
RFT1Q96AA3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.02■□□□□ -0
RFT1Q96AA3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.02■□□□□ -0
RFT1Q96AA3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.02■□□□□ -0
RFT1Q96AA3 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.02■□□□□ -0
RFT1Q96AA3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.02■□□□□ -0
RFT1Q96AA3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFT1Q96AA3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.02□□□□□ -0.01
RFT1Q96AA3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
RFT1Q96AA3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.02□□□□□ -0.01
RFT1Q96AA3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.02□□□□□ -0.01
RFT1Q96AA3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.02□□□□□ -0.01
RFT1Q96AA3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.02□□□□□ -0.01
RFT1Q96AA3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
RFT1Q96AA3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
RFT1Q96AA3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFT1Q96AA3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFT1Q96AA3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.01□□□□□ -0.01
RFT1Q96AA3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms