Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
SEMA4DQ92854 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4DQ92854 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 CXCL1P1-201ENST00000502804 216 ntBASIC18.13■□□□□ 0.49
SEMA4DQ92854 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEMA4DQ92854 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SEMA4DQ92854 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 CRYGEP-201ENST00000412192 528 ntBASIC18.12■□□□□ 0.49
SEMA4DQ92854 KRT18P2-201ENST00000447938 1258 ntBASIC18.12■□□□□ 0.49
SEMA4DQ92854 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 AC005412.3-201ENST00000580309 715 ntBASIC18.12■□□□□ 0.49
SEMA4DQ92854 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 CYP2A7P1-201ENST00000595391 815 ntBASIC18.12■□□□□ 0.49
SEMA4DQ92854 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 AC120114.3-201ENST00000611923 658 ntBASIC18.12■□□□□ 0.49
SEMA4DQ92854 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 AC124067.4-201ENST00000519691 2379 ntBASIC18.12■□□□□ 0.49
SEMA4DQ92854 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 AC006538.1-201ENST00000567905 1585 ntBASIC18.12■□□□□ 0.49
SEMA4DQ92854 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SEMA4DQ92854 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEMA4DQ92854 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SEMA4DQ92854 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SEMA4DQ92854 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 AL118508.1-201ENST00000613502 2345 ntBASIC18.11■□□□□ 0.49
SEMA4DQ92854 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SEMA4DQ92854 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SEMA4DQ92854 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 AC010507.1-201ENST00000633895 436 ntBASIC18.11■□□□□ 0.49
SEMA4DQ92854 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SEMA4DQ92854 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SEMA4DQ92854 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SEMA4DQ92854 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SEMA4DQ92854 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SEMA4DQ92854 AL512652.2-201ENST00000625156 1716 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms