Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 CICP23-201ENST00000605013 2741 ntBASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 AL138688.1-201ENST00000624851 1594 ntBASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 KATNBL1P6-202ENST00000562413 1466 ntBASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.92
SPTSSBQ8NFR3 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 NT5C3AP1-201ENST00000394500 1012 ntBASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 AL162412.1-201ENST00000567129 965 ntBASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 AC100791.3-201ENST00000617619 330 ntBASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SPTSSBQ8NFR3 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SPTSSBQ8NFR3 AL096828.2-201ENST00000567259 1965 ntBASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms