Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 AC005915.1-201ENST00000624912 2018 ntBASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 AC022211.2-201ENST00000585075 2527 ntBASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 PRSS29P-201ENST00000440800 595 ntBASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 MIR7706-201ENST00000613747 67 ntBASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 AC116407.3-201ENST00000623905 1129 ntBASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 AC117500.6-201ENST00000624871 588 ntBASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SRFBP1Q8NEF9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 LINC00895-201ENST00000629028 1637 ntBASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 AC098831.1-202ENST00000438821 336 ntBASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 AC009078.2-202ENST00000463353 338 ntBASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 RNA5SP419-201ENST00000515908 135 ntBASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 AC091167.2-201ENST00000579581 588 ntBASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 AC010654.1-201ENST00000615722 808 ntBASIC16.12■□□□□ 0.17
SRFBP1Q8NEF9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms