Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 MIR4525-201ENST00000580000 75 ntBASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 AC073389.1-201ENST00000595595 795 ntBASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC26.03■■□□□ 1.76
CFAP43Q8NDM7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 AC139713.2-201ENST00000641328 2723 ntBASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 AP3S2-216ENST00000617003 1561 ntBASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 DFFBP1-201ENST00000433250 979 ntBASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 AC092658.1-201ENST00000505836 891 ntBASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 PRYP6-201ENST00000514804 343 ntBASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 AC021097.1-201ENST00000607902 574 ntBASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP43Q8NDM7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC26.01■■□□□ 1.76
CFAP43Q8NDM7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC26.01■■□□□ 1.76
CFAP43Q8NDM7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.76
CFAP43Q8NDM7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CFAP43Q8NDM7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CFAP43Q8NDM7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CFAP43Q8NDM7 AL133373.2-201ENST00000623187 2828 ntBASIC26■■□□□ 1.75
CFAP43Q8NDM7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CFAP43Q8NDM7 AC087499.5-201ENST00000452760 1342 ntBASIC26■■□□□ 1.75
CFAP43Q8NDM7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CFAP43Q8NDM7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC26■■□□□ 1.75
CFAP43Q8NDM7 AL353779.1-201ENST00000434793 351 ntBASIC26■■□□□ 1.75
CFAP43Q8NDM7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC26■■□□□ 1.75
CFAP43Q8NDM7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC26■■□□□ 1.75
CFAP43Q8NDM7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC26■■□□□ 1.75
CFAP43Q8NDM7 AP001350.2-201ENST00000625104 1094 ntBASIC26■■□□□ 1.75
CFAP43Q8NDM7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC26■■□□□ 1.75
CFAP43Q8NDM7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CFAP43Q8NDM7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
CFAP43Q8NDM7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CFAP43Q8NDM7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CFAP43Q8NDM7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CFAP43Q8NDM7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CFAP43Q8NDM7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC26■■□□□ 1.75
CFAP43Q8NDM7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC25.99■■□□□ 1.75
CFAP43Q8NDM7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms