Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 MCCD1P2-201ENST00000423228 335 ntBASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 AC005829.1-201ENST00000570002 483 ntBASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 OR6D1P-203ENST00000641209 4860 ntBASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 ALG1L5P-201ENST00000482043 771 ntBASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 AL513190.1-201ENST00000621254 727 ntBASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC33Q8N5R6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 AC008667.4-201ENST00000607370 168 ntBASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 AC002310.6-201ENST00000624451 1377 ntBASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms