Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 AC004890.2-204ENST00000481968 304 ntBASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 AC027307.3-201ENST00000594262 1100 ntBASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
TMEFF1Q8IYR6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEFF1Q8IYR6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.71■□□□□ 0.26
TMEFF1Q8IYR6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 MRPS18AP1-201ENST00000414458 589 ntBASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEFF1Q8IYR6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 TOP3BP1-201ENST00000420768 1380 ntBASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 SLC25A6P5-201ENST00000435663 894 ntBASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 AC003101.2-201ENST00000612557 442 ntBASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 AL590560.3-201ENST00000623350 461 ntBASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 AC073592.8-201ENST00000624126 511 ntBASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEFF1Q8IYR6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms