Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 AL603756.1-201ENST00000606511 2163 ntBASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 AC117500.6-201ENST00000624871 588 ntBASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC65Q8IXS2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 MRPL20P1-201ENST00000400819 433 ntBASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 AC108073.2-201ENST00000464002 357 ntBASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 RNA5SP419-201ENST00000515908 135 ntBASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 AC091167.2-201ENST00000579581 588 ntBASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 MPDU1-223ENST00000582151 728 ntBASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 SLC25A6P4-201ENST00000586535 553 ntBASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC65Q8IXS2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 AC009078.2-202ENST00000463353 338 ntBASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 AC107918.2-201ENST00000530817 355 ntBASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC65Q8IXS2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms