Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 PTCHD3P3-201ENST00000403073 906 ntBASIC16.2■□□□□ 0.18
RAB43Q86YS6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 ACTG1P4-201ENST00000425123 1122 ntBASIC16.2■□□□□ 0.18
RAB43Q86YS6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 MST1L-201ENST00000442552 2185 ntBASIC16.2■□□□□ 0.18
RAB43Q86YS6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 AL596257.1-201ENST00000641463 2694 ntBASIC16.2■□□□□ 0.18
RAB43Q86YS6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 AC018845.2-201ENST00000568326 409 ntBASIC16.19■□□□□ 0.18
RAB43Q86YS6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 PP12613-201ENST00000424958 2230 ntBASIC16.19■□□□□ 0.18
RAB43Q86YS6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB43Q86YS6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB43Q86YS6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms