Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALYREFQ86V81 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.73■□□□□ 0.43
ALYREFQ86V81 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALYREFQ86V81 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ALYREFQ86V81 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.73■□□□□ 0.43
ALYREFQ86V81 AC008894.3-201ENST00000624324 3103 ntBASIC17.73■□□□□ 0.43
ALYREFQ86V81 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ALYREFQ86V81 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ALYREFQ86V81 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.73■□□□□ 0.43
ALYREFQ86V81 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ALYREFQ86V81 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALYREFQ86V81 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALYREFQ86V81 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 AC068472.1-201ENST00000474589 881 ntBASIC17.72■□□□□ 0.43
ALYREFQ86V81 AC051619.7-201ENST00000568314 623 ntBASIC17.72■□□□□ 0.43
ALYREFQ86V81 MIR4525-201ENST00000580000 75 ntBASIC17.72■□□□□ 0.43
ALYREFQ86V81 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 LINC01126-201ENST00000623515 1646 ntBASIC17.72■□□□□ 0.43
ALYREFQ86V81 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ALYREFQ86V81 CU639417.3-201ENST00000624240 1404 ntBASIC17.72■□□□□ 0.43
ALYREFQ86V81 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALYREFQ86V81 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALYREFQ86V81 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ALYREFQ86V81 AL139384.1-201ENST00000612143 3047 ntBASIC17.71■□□□□ 0.43
ALYREFQ86V81 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALYREFQ86V81 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALYREFQ86V81 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ALYREFQ86V81 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ALYREFQ86V81 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALYREFQ86V81 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALYREFQ86V81 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALYREFQ86V81 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALYREFQ86V81 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 PIN1P1-201ENST00000412108 996 ntBASIC17.7■□□□□ 0.42
ALYREFQ86V81 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 IGHV3-42-201ENST00000520410 361 ntBASIC17.7■□□□□ 0.42
ALYREFQ86V81 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms