Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP50Q70EL3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.65■□□□□ 0.74
USP50Q70EL3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP50Q70EL3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.65■□□□□ 0.74
USP50Q70EL3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.65■□□□□ 0.74
USP50Q70EL3 FRMD8P1-201ENST00000440433 1524 ntBASIC19.65■□□□□ 0.74
USP50Q70EL3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP50Q70EL3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.65■□□□□ 0.74
USP50Q70EL3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
USP50Q70EL3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP50Q70EL3 AC133963.1-201ENST00000504166 1679 ntBASIC19.65■□□□□ 0.74
USP50Q70EL3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
USP50Q70EL3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
USP50Q70EL3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
USP50Q70EL3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP50Q70EL3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.65■□□□□ 0.74
USP50Q70EL3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP50Q70EL3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP50Q70EL3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP50Q70EL3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP50Q70EL3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP50Q70EL3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.64■□□□□ 0.73
USP50Q70EL3 AC004945.1-201ENST00000416738 983 ntBASIC19.64■□□□□ 0.73
USP50Q70EL3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.64■□□□□ 0.73
USP50Q70EL3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.64■□□□□ 0.73
USP50Q70EL3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.64■□□□□ 0.73
USP50Q70EL3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.64■□□□□ 0.73
USP50Q70EL3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.64■□□□□ 0.73
USP50Q70EL3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.64■□□□□ 0.73
USP50Q70EL3 MIR8072-201ENST00000614241 80 ntBASIC19.64■□□□□ 0.73
USP50Q70EL3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.64■□□□□ 0.73
USP50Q70EL3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.64■□□□□ 0.73
USP50Q70EL3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.64■□□□□ 0.73
USP50Q70EL3 AC093525.9-201ENST00000624961 1746 ntBASIC19.64■□□□□ 0.73
USP50Q70EL3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.64■□□□□ 0.73
USP50Q70EL3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP50Q70EL3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.64■□□□□ 0.73
USP50Q70EL3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
USP50Q70EL3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP50Q70EL3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
USP50Q70EL3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USP50Q70EL3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP50Q70EL3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.63■□□□□ 0.73
USP50Q70EL3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP50Q70EL3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.63■□□□□ 0.73
USP50Q70EL3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.63■□□□□ 0.73
USP50Q70EL3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.63■□□□□ 0.73
USP50Q70EL3 AC024267.1-201ENST00000582320 895 ntBASIC19.63■□□□□ 0.73
USP50Q70EL3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.63■□□□□ 0.73
USP50Q70EL3 AC026979.3-201ENST00000607315 403 ntBASIC19.63■□□□□ 0.73
USP50Q70EL3 MIR6069-201ENST00000620069 79 ntBASIC19.63■□□□□ 0.73
USP50Q70EL3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.63■□□□□ 0.73
USP50Q70EL3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP50Q70EL3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.63■□□□□ 0.73
USP50Q70EL3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP50Q70EL3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.62■□□□□ 0.73
USP50Q70EL3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP50Q70EL3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP50Q70EL3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP50Q70EL3 AC020907.1-201ENST00000616460 1350 ntBASIC19.62■□□□□ 0.73
USP50Q70EL3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP50Q70EL3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP50Q70EL3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.62■□□□□ 0.73
USP50Q70EL3 SLC25A1P3-201ENST00000395415 828 ntBASIC19.62■□□□□ 0.73
USP50Q70EL3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms