Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.9■□□□□ 0.3
GDPD4Q6W3E5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDPD4Q6W3E5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.9■□□□□ 0.3
GDPD4Q6W3E5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GDPD4Q6W3E5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.89■□□□□ 0.3
GDPD4Q6W3E5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 PMS2P4-201ENST00000412466 1052 ntBASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 AC092474.2-201ENST00000424288 719 ntBASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 DNAJB3-202ENST00000449667 1266 ntBASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 AC109635.5-201ENST00000533593 962 ntBASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 AL161645.1-201ENST00000622716 1255 ntBASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDPD4Q6W3E5 LINC00895-201ENST00000629028 1637 ntBASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 AL355306.1-201ENST00000415580 579 ntBASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 AC254562.1-201ENST00000417586 456 ntBASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 AL671277.1-201ENST00000429656 993 ntBASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 SNHG9-202ENST00000564014 471 ntBASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 MIR3909-201ENST00000579518 119 ntBASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 AP001160.2-201ENST00000596071 487 ntBASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 AL596442.2-201ENST00000610240 980 ntBASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.88■□□□□ 0.29
GDPD4Q6W3E5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 AL391256.1-201ENST00000443260 1855 ntBASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 FAM86C2P-203ENST00000528684 1004 ntBASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.87■□□□□ 0.29
GDPD4Q6W3E5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms