Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.53■□□□□ 0.4
TRNP1Q6NT89 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.53■□□□□ 0.4
TRNP1Q6NT89 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 KRT8P39-201ENST00000396270 1433 ntBASIC17.53■□□□□ 0.4
TRNP1Q6NT89 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 GGT4P-201ENST00000623672 1708 ntBASIC17.52■□□□□ 0.4
TRNP1Q6NT89 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 PCDHB19P-201ENST00000570871 2371 ntBASIC17.52■□□□□ 0.4
TRNP1Q6NT89 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 HCG4-201ENST00000418983 998 ntBASIC17.52■□□□□ 0.4
TRNP1Q6NT89 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 HLA-J-202ENST00000469281 1241 ntBASIC17.52■□□□□ 0.4
TRNP1Q6NT89 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 MIR4515-201ENST00000584082 81 ntBASIC17.52■□□□□ 0.4
TRNP1Q6NT89 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRNP1Q6NT89 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.52■□□□□ 0.39
TRNP1Q6NT89 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRNP1Q6NT89 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TRNP1Q6NT89 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRNP1Q6NT89 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRNP1Q6NT89 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.52■□□□□ 0.39
TRNP1Q6NT89 AC012569.1-201ENST00000591191 1524 ntBASIC17.52■□□□□ 0.39
TRNP1Q6NT89 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 AC079328.2-201ENST00000561241 3354 ntBASIC17.51■□□□□ 0.39
TRNP1Q6NT89 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 AL031731.1-201ENST00000642131 2094 ntBASIC17.51■□□□□ 0.39
TRNP1Q6NT89 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 AL022342.1-201ENST00000400363 863 ntBASIC17.51■□□□□ 0.39
TRNP1Q6NT89 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 ZNF259P1-201ENST00000407656 1365 ntBASIC17.51■□□□□ 0.39
TRNP1Q6NT89 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.51■□□□□ 0.39
TRNP1Q6NT89 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRNP1Q6NT89 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms