Protein–RNA interactions for Protein: Q5J8X5

MS4A13, Membrane-spanning 4-domains subfamily A member 13, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A13Q5J8X5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 AC002056.1-201ENST00000395613 760 ntBASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 CEND1P1-201ENST00000451006 455 ntBASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 SNX33P1-201ENST00000592116 1762 ntBASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 AL671710.1-201ENST00000610245 2349 ntBASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 AL009183.1-201ENST00000603760 355 ntBASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A13Q5J8X5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 RNF216P1-203ENST00000404404 2427 ntBASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 AL031055.1-201ENST00000606362 631 ntBASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 AC099522.2-201ENST00000607001 744 ntBASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
MS4A13Q5J8X5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms