Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 AL590627.1-203ENST00000421194 1026 ntBASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 AC005412.3-201ENST00000580309 715 ntBASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN20Q4JDL3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 CXCL1P1-201ENST00000502804 216 ntBASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 CYP2A7P1-201ENST00000595391 815 ntBASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 AL139011.1-202ENST00000642063 584 ntBASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 AC006538.1-201ENST00000567905 1585 ntBASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN20Q4JDL3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 CRYGEP-201ENST00000412192 528 ntBASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 RPL13AP23-201ENST00000480739 586 ntBASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 BX640515.1-201ENST00000617215 977 ntBASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
PTPN20Q4JDL3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms