Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SHROOM1Q2M3G4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 AC002472.2-201ENST00000442739 958 ntBASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM1Q2M3G4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 IGHV3-42-201ENST00000520410 361 ntBASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 AC060834.1-201ENST00000443027 2032 ntBASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM1Q2M3G4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 BASP1P1-201ENST00000430708 665 ntBASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 TSPY16P-201ENST00000449843 468 ntBASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 AP3S2-216ENST00000617003 1561 ntBASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.55■□□□□ 0.72
SHROOM1Q2M3G4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 AC005332.8-201ENST00000622750 2735 ntBASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHROOM1Q2M3G4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms