Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.09■□□□□ 0.81
PDS5AQ29RF7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 KLF2P3-201ENST00000451977 1087 ntBASIC20.09■□□□□ 0.81
PDS5AQ29RF7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 AC005498.2-205ENST00000593218 784 ntBASIC20.09■□□□□ 0.81
PDS5AQ29RF7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 AC060834.1-201ENST00000443027 2032 ntBASIC20.09■□□□□ 0.81
PDS5AQ29RF7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDS5AQ29RF7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 AL390955.2-201ENST00000603032 514 ntBASIC20.08■□□□□ 0.81
PDS5AQ29RF7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 AC008677.1-201ENST00000519230 1561 ntBASIC20.08■□□□□ 0.81
PDS5AQ29RF7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 AL645728.1-201ENST00000366221 2101 ntBASIC20.08■□□□□ 0.81
PDS5AQ29RF7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
PDS5AQ29RF7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 AC073439.1-201ENST00000624121 1774 ntBASIC20.08■□□□□ 0.8
PDS5AQ29RF7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDS5AQ29RF7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 HLA-J-202ENST00000469281 1241 ntBASIC20.07■□□□□ 0.8
PDS5AQ29RF7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 AC140878.1-201ENST00000565277 250 ntBASIC20.07■□□□□ 0.8
PDS5AQ29RF7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms