Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
KCNA1Q09470 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
KCNA1Q09470 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNA1Q09470 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNA1Q09470 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
KCNA1Q09470 CRYGEP-201ENST00000412192 528 ntBASIC18.54■□□□□ 0.56
KCNA1Q09470 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.54■□□□□ 0.56
KCNA1Q09470 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.54■□□□□ 0.56
KCNA1Q09470 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.54■□□□□ 0.56
KCNA1Q09470 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.54■□□□□ 0.56
KCNA1Q09470 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.54■□□□□ 0.56
KCNA1Q09470 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KCNA1Q09470 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.54■□□□□ 0.56
KCNA1Q09470 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
KCNA1Q09470 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.54■□□□□ 0.56
KCNA1Q09470 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KCNA1Q09470 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KCNA1Q09470 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNA1Q09470 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.54■□□□□ 0.56
KCNA1Q09470 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNA1Q09470 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNA1Q09470 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
KCNA1Q09470 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KCNA1Q09470 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
KCNA1Q09470 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.53■□□□□ 0.56
KCNA1Q09470 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
KCNA1Q09470 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
KCNA1Q09470 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
KCNA1Q09470 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.53■□□□□ 0.56
KCNA1Q09470 CXCL1P1-201ENST00000502804 216 ntBASIC18.53■□□□□ 0.56
KCNA1Q09470 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
KCNA1Q09470 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
KCNA1Q09470 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.53■□□□□ 0.56
KCNA1Q09470 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.53■□□□□ 0.56
KCNA1Q09470 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.53■□□□□ 0.56
KCNA1Q09470 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.53■□□□□ 0.56
KCNA1Q09470 AC064836.3-201ENST00000607928 673 ntBASIC18.53■□□□□ 0.56
KCNA1Q09470 AC010507.1-201ENST00000633895 436 ntBASIC18.53■□□□□ 0.56
KCNA1Q09470 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.53■□□□□ 0.56
KCNA1Q09470 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.53■□□□□ 0.56
KCNA1Q09470 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.53■□□□□ 0.56
KCNA1Q09470 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
KCNA1Q09470 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.53■□□□□ 0.56
KCNA1Q09470 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
KCNA1Q09470 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KCNA1Q09470 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.52■□□□□ 0.56
KCNA1Q09470 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.52■□□□□ 0.56
KCNA1Q09470 AC131009.4-201ENST00000624048 1740 ntBASIC18.52■□□□□ 0.56
KCNA1Q09470 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.52■□□□□ 0.56
KCNA1Q09470 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
KCNA1Q09470 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.52■□□□□ 0.56
KCNA1Q09470 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
KCNA1Q09470 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
KCNA1Q09470 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
KCNA1Q09470 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 AL022342.1-201ENST00000400363 863 ntBASIC18.52■□□□□ 0.56
KCNA1Q09470 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.52■□□□□ 0.56
KCNA1Q09470 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
KCNA1Q09470 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.52■□□□□ 0.56
KCNA1Q09470 AC018845.2-201ENST00000568326 409 ntBASIC18.52■□□□□ 0.56
KCNA1Q09470 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.52■□□□□ 0.56
KCNA1Q09470 AL671883.3-201ENST00000603274 991 ntBASIC18.52■□□□□ 0.56
KCNA1Q09470 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.52■□□□□ 0.56
KCNA1Q09470 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.52■□□□□ 0.56
KCNA1Q09470 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.52■□□□□ 0.56
KCNA1Q09470 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KCNA1Q09470 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.52■□□□□ 0.56
KCNA1Q09470 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.52■□□□□ 0.56
KCNA1Q09470 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
KCNA1Q09470 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
KCNA1Q09470 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KCNA1Q09470 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KCNA1Q09470 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.52■□□□□ 0.55
KCNA1Q09470 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms